R/mcmc-kernels.R
mcmc_metropolis_adjusted_langevin_algorithm.RdMetropolis-adjusted Langevin algorithm (MALA) is a Markov chain Monte Carlo
(MCMC) algorithm that takes a step of a discretised Langevin diffusion as a
proposal. This class implements one step of MALA using Euler-Maruyama method
for a given current_state and diagonal preconditioning volatility matrix.
mcmc_metropolis_adjusted_langevin_algorithm( target_log_prob_fn, step_size, volatility_fn = NULL, seed = NULL, parallel_iterations = 10, name = NULL )
| target_log_prob_fn | Function which takes an argument like
|
|---|---|
| step_size |
|
| volatility_fn | function which takes an argument like
|
| seed | integer to seed the random number generator. |
| parallel_iterations | the number of coordinates for which the gradients of
the volatility matrix |
| name | String prefixed to Ops created by this function.
Default value: |
Mathematical details and derivations can be found in Roberts and Rosenthal (1998) and Xifara et al. (2013).
The one_step function can update multiple chains in parallel. It assumes
that all leftmost dimensions of current_state index independent chain states
(and are therefore updated independently). The output of
target_log_prob_fn(current_state) should reduce log-probabilities across
all event dimensions. Slices along the rightmost dimensions may have different
target distributions; for example, current_state[0, :] could have a
different target distribution from current_state[1, :]. These semantics are
governed by target_log_prob_fn(current_state). (The number of independent
chains is tf.size(target_log_prob_fn(current_state)).)
Other mcmc_kernels:
mcmc_dual_averaging_step_size_adaptation(),
mcmc_hamiltonian_monte_carlo(),
mcmc_metropolis_hastings(),
mcmc_no_u_turn_sampler(),
mcmc_random_walk_metropolis(),
mcmc_replica_exchange_mc(),
mcmc_simple_step_size_adaptation(),
mcmc_slice_sampler(),
mcmc_transformed_transition_kernel(),
mcmc_uncalibrated_hamiltonian_monte_carlo(),
mcmc_uncalibrated_langevin(),
mcmc_uncalibrated_random_walk()